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Hello, I got this error:
```
Error in createOncoMatrix(m = maf, g = genes) :
object 'sampleId' not found
```
trying to load a maf with one sample, can you help me?
Thanks.
ghost updated
5 years ago
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Issue criada para documentar o passo-a-passo no desenvolvimento da rotina de processamento do dataset hg19_gnomad_exome. Os passos a seguir serão realizados:
- [x] Exploração do dataset por meio de…
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The clinvar_20180603 databases are not in the avdblist file as of Jul 25.
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```sh
$ lg3 --version
2018-10-08
$ cat _Pindel_Patient157_t10_underscore.out
[...]
Input:
- datafile=Patient157_t10_underscore.indels
- interval=/cbc2/data2/henrik/repositories/UCSF-CostelloL…
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Honored Gentlemen, I found a significant position(chr9:136501794) doesn't appear in 20180603 version clinvar, but it still been found in 20170905 version clinvar. When I go to Clinvar website, there …
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Issue criada para documentar o passo-a-passo no desenvolvimento da rotina de processamento do dataset hg19_gerp++elem. Os passos a seguir serão realizados:
- [x] Exploração do dataset por meio de n…
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Dear madam/sir,
I have recently tried to use ISOWN, and I was getting a seqmentation fault error when doing the first annotations. I found out that this happens when the software is using qpipeline…
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I do not know if this is a feature, bug, or user error. When providing a VCF to ANNOVAR via `table_annovar.pl -vcfinput` the output VCF has altered character encoding for punctuation that is part of s…
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Issue criada para documentar o passo-a-passo no desenvolvimento da rotina de processamento do dataset hg19_avsnp150. Os passos a seguir serão realizados:
- [x] Exploração do dataset por meio de not…
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Hi I got the following error when i tried to annotate test data file provided in the test_data folder. How can I resolve it?
annotating input file with ANNOVAR ...NOTICE: Output files were written …