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If a bunch of tracks are opened at once, then many duplicate file handles are opened for config.properties, basically until it hits the system limit.
Normal operation: around 250 file handles open
A…
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Below are errors that are now always present when launching WA. Are these "expected".
I don't recall seeing these ones before. Do we know what is causing these warnings?
This happened when launching…
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not creating the jbrowse "bin" directory properly during deployment. Here is the setup.log:
- cd src/main/webapp/jbrowse
./install_jbrowse.sh: line 25: cd: src/main/webapp/jbrowse: No such file or …
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The view here is pretty minimal. What changes are necessary to allow styling and basic edits to layout? Can the plugin system alter this?
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At the hackaton this past January, some changes were made to the server/WebApollo/src/org/bbop/apollo/web/Login.java file to support OAuth authentication. It changed the way HTTP GETs were handled. …
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Dear,
I`m trying to configure WebApollo but I have some issues. here the error:
this is the first (maybe a note not an error)
Note: /home/luigi/Downloads/Apollo/target/work/plugins/shiro-1.2.1/src/j…
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Hi,
The browser has a lot of code incompatibility with existing modern standards such as css hide rules. While the browser itself loads data quiet fast and works wonderfully when implemented into a s…
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For example, variants that are known to be associated with particular phenotypes can be hidden or shown, or appear in different colors, based on what that phenotype is. That way you can see the landsc…
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Hi,
A final enhancement I'd love to see on VCF is the ability to mark a user validation against a variant in a VCF track.
Basically store the variant ID and a decision (options from track config) in…
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![Snap1](https://f.cloud.github.com/assets/2962704/19669/142895d6-492a-11e2-907f-6ead244fc03e.png)
Following command works well on version Jbrowse-1.2.1
perl bin/prepare-refseqs.pl --fasta ath.fa
per…
lfgu updated
11 years ago