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_From @BarbaraCzub on August 25, 2017 16:53_
I have just noticed that although the GO term name of GO:0006900 was changed from 'membrane budding' to 'vesicle budding from membrane' over a month ago…
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_From @BarbaraCzub on August 25, 2017 14:25_
Is there a way to select a few individuals and annotons in a model to move them around the canvas as a group?
E.g. when a new annoton is added to an …
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This ticket is to evaluate:
https://github.com/geneontology/go-graphstore/pull/2
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Is there a way to track the history of changes that have been made to a model?
ref: http://noctua.berkeleybop.org/editor/graph/gomodel:586fc17a00001446
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Minerva adds a JSON version of each model as an annotation value on the model itself. I think this was previously used by epione. These can be "huge" text blobs and don't seem to be needed anymore. Cu…
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This model:
ID - gomodel:59bee34700000110
Name - TEST: causally upstream of - KRC
contains three lines, each with at least one 'causally upstream of or within' relationship.
Only one of them g…
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Rough sketch of concept:
TBD:
* Write-only vs read-write
* Hardwire row graph t…
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This question came up in a discussion about Noctua in the context of Planteome. Currently, all produced models will generate ids like gomodel:203974209734902. Given that GO and Planteome have their ow…
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We currently have a rule that infers contributes_to for all components of a complex when a complex enables an activity. Based on discussion at the GO editor's training workshop, this appears too loos…
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An idea developed in GPAD inference discussion with @ukemi and @vanaukenk: add a panel to Noctua containing a table of potential annotations (i.e. inferred direct relations, between gene products and …