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I try to run mri_synthseg from a docker image but I get the following error:
> docker run --rm -it --platform linux/amd64 freesurfer/freesurfer:7.3.2 mri_synthseg
`F tensorflow/core/lib/monitor…
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Why are the atlases being transformed from MNI space if the bold files are in MNI space/ are we missing the back-transform somehow?
This would affect func_corr matrixes too, as well as parcellation
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Is there an array you have that can map the ordering of the parcels in the 17 network solution to the 7 network solution, and vice versa? Basically, we have data made in the 17 network ordering, but w…
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there appears to be a mismatch in dimensions between the HCP-development preprocessed dtseries file and the schaefer parcellation?
```
xii
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Hi,
I wanted to add a parcellation to a volume source space with 3D vectors (`stc_nd` is a `VolVectorSourceEstimate`):
```
meg_source_combined = eb.load.fiff.stc_ndvar(stc_nd, src='vol-7', subj…
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The labels for the `inputFeatMatrix.h5` are provided separately in the training data as `sf_clusters_label.h5` and there is `tract_feat.py` in the DeepWMA code which reorients the labels to groups of …
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I'm trying to draw roi on fsaverage surface based on Glasser parcellation (from : https://github.com/neurodata/neuroparc/atlases/label/Human/Glasser_space-MNI152NLin6_res-1x1x1.nii.gz). The transfor…
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**Submitting author:** @pbellec (Pierre Bellec)
**Repository:** https://github.com/pbellec/editorial_parcellation
**Editor:** @agahkarakuzu
**Reviewers:** @anirudhk686
**Managing EiC:** Pierre Bellec…
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Hi,
Your visualization tool is prettey useful!
But i meet an problem while using your plotsurface example, there are only aparc and HCPMMP1 parcellation, I hope to add the aparc.a2009s ROI as an 16…