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My trajectory contains ASH residues, which is protonated ASP for AMBER, albeit non-standard.
I guess `Toplogy.select('protein')` fails to parse atoms in such residues as protein, since `__AMINO_ACI…
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1. pick in the spec the minimum requirements (as a baseline for the interoperability between the different implementation)
2. list what's missing currently in the spec that should be tested for
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How do you collect the creeper acid, I have it toggled to drain output tank but it wont drain from a bucket, or EnderIO tanks, which it says it can
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**Feature description**
This new feature idea came to me because I noticed that when you hook up an acid syringe or gorse blood tank to the new liquid outlet and put a human underneath, the human wil…
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Convert the `ComplexHeatmap` code to a function in the package. Allow users to select their given assay, and the start and end positions of the protein for plotting.
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This is a subsection of the (as yet unpublished) Uric Acid and Vitamins section. So once that is published, I need to add links to the start and end of Ascorbic Acid & Uric Acid Research.
If you wo…
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Dear MaxQuant team,
Would it be possible to define new one-letter symbols for unnatural amino acids in MaxQuant? That would be very helpful.
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Hi Adnan,
hope you are doing well.
We have dozens if not more classes of anionic gangliosides in ChEBI and Rhea; but these are not currently classified as gangliosides, nor lipids. This issue …
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Hi there!
I saw your paper on arXiv, and decided to try ACID for a project I'm working on. I have 145 echelle spectra of the same object with 71 orders each. While I was able to get through a succe…
tzdwi updated
3 months ago
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Hi Theo - my group has a tree of 127k M. tuberculosis genomes, 212k nodes. The M.tb genome is 4.4Mb and there are many mutations in the tree. With nucleotide mutations only, the first line of the .j…