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Hi Dallas,
I've noticed that for the larger CAZy families (say >900 sequences) cazy_extract fails to download all of the unique fasta records from NCBI, but rather downloads multiple copies of the …
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Hi,
I successfully installed SACCHARIS and additional software. I tried to follow the example from your publication to test the pipeline and got an error message after the cazy_extract.pl script. …
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Hello. Having an issue with `atlas assemble` on Ubuntu 16.04. Dependencies have been installed and using atlas_env.
`atlas assemble mgm4637809.3.yaml`
...
`subprocess.CalledProcessError: Command …
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This paper (PMID: 24649402) shows different substrate specificities of 4 isomaltases (IMA1, IMA2, IMA3, IMA5). Specifically, the enzymes are only active on alpha-D-glucopyranosides. They show the fo…