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Dear dada2 enthusiasts,
I'm pretty new to dada2 so I would like to hear some opinions from those who are experts and use dada2 regularly about my issue analysis.
I have tried using filterAndTrim…
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Hi there,
I am trying to run pred.GCN = predict_16SGCN_from_sequences(), following the information provided @ https://github.com/wu-lab-uva/RasperGade16S
However, I get the following:
No FAST…
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**Lab Name**: Bioinformatics and Data Science in Biotechnology Lab
**Department**: Biotechnology and Biomedical Engineering
**List of Experiments and Repositories**:
1: Writing and…
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Dear developers,
I have succed in running HiTE pipeline, but the statistics of the results (HiTE.tbl) reports results for only the LTR repetitions and the simple repeats. The log file does not highl…
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Dear,
Thank you for implementing this great tool.
I have a few questions about the applicability of Revio data. I am not very familiar with library preparation, but I was given metagenomic seque…
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*Highlights*
With 50% of the samples analysed we can share the following highlights:
17.5L of water - roughly two buckets, contained:
-over 20 million DNA sequences of which 12,500 unique seque…
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**Binning DNA sequences**
_Write a program which creates nine new folders – one for sequences between 100 and 199 bases long, one for sequences between 200 and 299 bases long, etc.
Write out each …
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Dear Team,
I have been working on developing the generative model for DNA sequences. For a fair comparison, I compare different algorithms in the unconditional generation case. It seems that DDSM f…
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Hello,
I am currently working on scaffolding an F1 hybrid genome, which has 55 chromosomes per haplotype: 27 chromosomes from parental species 1 and 28 from parental species 2. I am using HiFi / H…
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Upgrade the libraries in pubspec.yaml, and make note of the libraries that are unable to be fully updated, including Dart itself.
Get rid of libraries we don't use anymore, like `codemirror` and `r…