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**Context:**
I'm currently investigating some issues differentiating MLIR-generated LLVMIR with Enzyme. Our pipeline roughly consists of `*Dialects -> LLVMDialect -> LLVMIR -> O2 -> Enzyme`. While in…
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#### Current behavior:
14 genes are discovered to be uncorrelated with their corresponding reactions in `Serotonin and melatonin biosynthesis`.
| Gene | UniProtID | Reaction | GPR| Correlati…
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**Context:**
I'm not sure whether this is a bug or I'm not understanding what Enzyme is warning me about, so some information on possible sources of the error would be really appreciated. The error m…
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I'm writing a custom rule for a function that takes, among other args, an Active tuple/namedtuple. This throws an error when the values in the tuple are taken from arrays at indices determined at runt…
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#### Current behavior:
24 genes are discovered to be uncorrelated with their corresponding reactions in Vitamin A/B2/C/D/E metabolism.
| Gene| UniProtID| Reaction| GPR| Correlation| Manually…
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When importing a function (with `autodiff` macro) from a module, the derivatives are missing. I created a minimal example [here](https://github.com/g-bauer/enzyme_playground).
```bash
# identical …
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This issue tracks a few ideas for improving the APIs we use for writing tests. This means reducing the amount of code needed for common uses, eliminating pitfalls etc.
This issue is a place to brains…
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#### Current behavior:
20 genes are discovered to be uncorrelated with their corresponding reactions in `Pentose phosphate pathway`, `Pyruvate metabolism` and `Tricarboxylic acid cycle and gl…
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We need USER cloning for [this](https://github.com/manulera/ShareYourCloning_backend/issues/63), so @manulera and I thought it would be better to implement it in `pydna`. I have a minimal working exam…
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I know that Enzyme is not yet fully supported by Turing, so apologies if this issue is mistimed.
While Enzyme boosts efficiency with a simple linear model, I noticed that adding a simple variable…