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After run_mcl and get_clusters, I found that one node belongs to two clusters. Is this method doing a soft clustering?
hw449 updated
6 months ago
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I've just been working with a translation that got pretty low alignment scores on the source text. I researched the language a bit and managed to find related languages that performed better.
This …
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https://cs.stanford.edu/people/jure/pubs/sampling-kdd06.pdf
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Sometimes, the graph is just too big for TGView to handle, .e.g. for the PVS NASA library, and - by extension - for all of MathHub. It would be good if we could have a mode of operation in TGView, whe…
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Following the guidelines in https://github.com/SparseRooflineBenchmark/SparseRooflineBenchmark/issues/16, let's create some smaller issues surrounding problem set generation. The following notes may b…
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Using k-means is a useful clustering method within a matrix. In the case that we have multiple matrices, would k-means still be as effective? Would the presence of so many dimensions pose a problem?
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Would like to have a page (in documentation and/or readme, but leaning towards just documentation) that basically explains each module at an extremely high level and why it might be useful. Could have…
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From Chris Shults (+ my edits for gEAR purposes)
gEAR would be most useful for users to compare their scRNASeq or scATACSeq data to for cell annotation. They should directly take the unlabeled clus…