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I ran into the following failures when building the melting pot with a J11 JDK:
```
[FAILURE] io.scif/scifio
[FAILURE] io.scif/scifio-hdf5
[FAILURE] io.scif/scifio-jai-imageio
[FAILURE] net.ima…
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I'm not able to print FFT results with ij.py.show!
```python
import skimage
import imagej
import numpy as np
from skimage import io
import imagej
import imglyb
from jnius import cast
from j…
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When I was trying to copy an image converted with LUT to a freshly created `Img`, the following happens:
```java
RandomAccessibleInterval floatImg = ArrayImgs.floats(128, 128);
RandomAccessibleInte…
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On Windows, it seems that Maven puts its `.m2` folder into `%USERPROFILE%\.m2` by default, whereas the default location for `.jgo` is `%HOME%\.jgo`.
This can be problematic in cases where `%HOME%` …
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`imglyb` does not support converting `bool` type images to numpy. This means that users are unable to convert masks/thresholded images into python numpy/xarray objects.
Here is a minimal example:
…
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https://github.com/imglib/imglib2-algorithm/blob/2d8ae779fdfac1c77ccc6578d794c2f8121fc938/src/main/java/net/imglib2/algorithm/labeling/ConnectedComponents.java#L494
I have a situation where I expec…
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A long-term wish from some users was to craft a jar file that is independent from ImageJ and/or ImageJ2. We should implement this later but have it in mind from the very beginning. I _think_ this coul…
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[ERROR] Command errored: Create new dataset from XML/HDF5
java.lang.NoSuchMethodError: net.imglib2.img.basictypeaccess.ArrayDataAccessFactory.get(Lnet/imglib2/type/NativeType;)Ljava/lang/Object;
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Using JNI's [`NewDirectByteBuffer`](https://docs.oracle.com/javase/8/docs/technotes/guides/jni/jni-14.html#NewDirectByteBuffer) function, one can wrap an existing memory address and length into an off…
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With the migration of imglib2-meta to imagej-common, we are refining the scope of our projects:
- The intent for imagej-common is to define the structure of image-related metadata.
- The intent for SC…