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I think, the VB can be improved by adding a known nonuniform covariance matrix to the noise model according to eq. (5) of [this document](https://git.bam.de/mechanics/ajafari/texts/-/blob/master/2021_…
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### Issue Description
**TL; DR**
Support for MLE, MAP, and Variational inference!
**Context**
In situations where scalability and speed need to be balanced with posterior sample quality, various…
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I've been working on doing gene-level summaries of metagenomes by exhaustively mapping reads with DIAMOND against a comprehensive non-redundant database of proteins (UniRef90). The result of this proc…
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In the [Collins paper](https://papers.nips.cc/paper/2001/file/f410588e48dc83f2822a880a68f78923-Paper.pdf) they write
Would it be possible to add the ability for each column in Y to be distributed…
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### Search before asking
- [X] I have searched the YOLOv8 [issues](https://github.com/ultralytics/ultralytics/issues) and [discussions](https://github.com/ultralytics/ultralytics/discussions) and f…
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## Goal
Add creative examples of Pyro code developed by users out in the real world to our catalog of examples and tutorials. This is great for the community as a whole and helps the Pyro dev team …
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The standard definition of BIC is
BIC = -2 log(L*) + k log(n)
where k is the number of parameters of the _full statistical model_. When assuming a model with Gaussian errors,
y = f(x) + e, e…
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Hi, I'm looking for a simple to use Bayesian MCMC sampler fully Python based. I've been trying `emcee` and now I've found Sampyl, which looks really good.
Before attempting to implement it though, …
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Kristian just explained what's going on in [this](http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004870) paper, and it turns out to be precisely what we need to do with unseede…
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As Taylor noted in code review yesterday, Puma is full of accidental use of C++ copy constructors in places where passing objects (including asymptotically large objects like vectors and sets) by cons…