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Hi there
I was running into some issues recently when I tried to assemble a small insect (250Mb) genome with Illumina (120x, PE 150bp) with ca 25x ONT 1D data. I am getting these buffer overflow is…
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Dear @alekseyzimin,
I am running Masurca and having as an input: Illumina PE reads + Nanopore long reads.
I ran the masurca with the same configuration file twice (in two seperate folders) and …
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HI,
If I would create an Illumina assembly then could I combine the Illumina assembly contigs together with pacbio reads and run Racon, miniasm, and minimap as a hybrid assembly?
Thank you in adv…
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I am assembling a chromosome out of a plant genome (Illumina data). But the server I use only allows me to run at most one-week per request. Is there any kind of "pause and resume" ability from MaSuRC…
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Hello,
I am running MaSuRCA for performing hybrid assemblies with PromethION and Illumina data. I am using Flye for final assembly of the corrected mega-reads.
The run finishes but in the MaSuR…
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CentOS Linux 7
perl v5.26.2
gcc version 8.3.0
error:
++ pwd -P
+ ROOT=/lustre1/leili_pkuhpc/software/MaSuRCA-3.4.2
+ '[' -z '' ']'
+ DEST=/lustre1/leili_pkuhpc/software/MaSuRCA-3.4.2
+ mkdir…
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Dear all,
When running Polca (but also when running the samtools file located in bin) I am getting this error:
samtools: error while loading shared libraries: libbam.so.0: cannot open shared ob…
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After the masurca was installed. runing the command: cd global-1/ && make check
Is it a software problem or a configuration error?
CentOS Linux 8.2
gcc version 8.3.1
```
[root@cori-knl spack-…
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Hi
Thank you for developing masurca..
Is there any way to direct the output of chromosome scaffolder tool to a directory?
Currently, the output is written to files in the working directory but I …