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### What version of the bids app were you using?
bids/brainsuite:v23a
### Describe your problem in detail.
I was trying run BrainSuite for resting-state analysis, and it failed to run.
My datase…
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I encounter some issues using fetch_neurovault:
* the filtering does not seem to work: the images returned do not have the expected 'cognitive_paradigm_cogatlas_id'
* it downloads many images -- mor…
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Hi @TaoZhong11 ,
Thanks for this amazing work!
I encountered an error while running the Docker image with data I obtained from https://fcon_1000.projects.nitrc.org/indi/PRIMEdownloads.html. To t…
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Hey,
I just noticed that we are not using consistent `space-flair` vs `space-FLAIR` file name labels. Is this intentional to distinguish between the prob masks, or just an oversight?
Check the f…
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Can you describe how to construct the
![1](https://github.com/user-attachments/assets/fe8603c6-c9d0-4d12-a6d3-58ea6fe57679)
caseID_cal_seg.nii.gz and caseID_cal_map.nii.gz ? Thank you~
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Redirecting discussion from #8.
> ```bash
> "dwibiascorrect: [ERROR] N4BiasFieldCorrection -d 3 -i mean_bzero.nii -w mask.nii -o [corrected.nii,init_bias.nii] -s 4 -b [100,3] -c [1000,0.0] (ants.p…
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### What version of the bids app were you using?
0.5.1.dev0+gd97c669.d20240412 / [docker://bids/giga_connectome@sha256:8b43fb8d198cc31f7cce757fa83ca98f4cf23b5c57800a8c876043b4341d4e7e](https://hub.…
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When the pwa is installed via chrome as local app, the following alias makes it work via command line:
`alias niivue='/usr/bin/google-chrome --app-id=pgienjkbgeffjnbagkbcacejihclfdeg'`
Opening image…
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Just some first ideas on how to structure the pipeline after a discussion during the 2024-08-08 SCT dev meeting:
# 1. Installation script
This script will be run only once and install SCT and d…
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Are sample 1 and sample 2 used for right and left kidney?
imaging.nii.gz is the raw data.
segmentation.nii.gz is masking information.
Is the raw data for masking and visualisation done with the sa…