-
if I use the latest `main` branch, a `venv` that @mgeplf created, and the unstable version of Ultraliser on BB5, certain tests do not pass. In particular, if I run `pytest tests/app/test_placement_hin…
-
Hi, I am new to ```pygalmesh```, I have a quick question about converting volume to mesh. Can this library convert nrrd CT volume file to the surface? I have a pipeline following:
1. Read nrrd file (…
-
How can we get 2d visual result from 3d .nrrd or 3d .mhd?
-
Hi,
I am trying to use the develop version to compute the lung partial volume mask. When I use `lung_lobe_segmentation_workflow.py`, it first complained that the `cip` (and a few other things) wer…
-
## Summary
When a seg.nrrd file uses `type: float` voxels then closed surface representation is not generated (nothing appears or only a single segment's 3D representation appears).
See full err…
-
Hi,
I understand how the code works and how to install ect.
I want to use this code on 4i multiplex images (similar to IBEX), my images are in TIF, so I have a few questions :
In the code ex…
-
Hi Matias, I think this may interest you, I already ported your volumetric renderer in Godot, not being aware of CSGBox3D I have already implemented the rendering with a MeshInstance3D, and I have als…
-
Now i can conver a .dcm, but don't know how to conver a .nrrd to a .jpg? I want use your projection, but so when read_nrrd or read_dcm, break! Help me!
-
It seems like NRRD.jl could in principle support saving AxisArrays that have categorical axes. At present, this doesn't appear to work. Per some of the NRRD documentation, on [this page](http://teem.s…
-
Thanks for your sharing ! I have a .nrrd medical file of hippocampus segmentation and I want to use your code to map the hippocampus to sphere, then I convert .nrrd file to obj file using slicer. I wa…