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Following manual review on 2021-11-03, the following files are missing either thumbnail or story.
## Vanderbilt HE missing both thumbnail and story
- [ ] Generated
- [ ] In assets bucket
- [ ] …
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As reported https://github.com/IDR/idr-metadata/issues/696#issuecomment-2188560610
- Image:38517 & Image:40053 - 5th & 7th plates of idr0008 (58 plates)
Viewing in webclient: `message = Error inst…
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To avoid re-importing Images when updating data to NGFF, we want to create a new Fileset for the NGFF data, and replace old Filesets.
Testing workflow:
Imported png:
https://merge-ci.openmicros…
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Zarr sharding has been merged into the Python Zarr v3 code: https://github.com/zarr-developers/zarr-python/pull/1111#event-8421675745
To improve on the concerns here: https://github.com/fractal-ana…
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After a recent ping from Caterina, I was working through the current proposal. Something occurred to me that I should have raised sooner:
https://github.com/WU-BIMAC/MicroscopyMetadata4DNGuidelines…
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**Describe the bug**
The contents of .extdata don't play nice with R CMD check.
excerpt from check
```
❯ checking for hidden files and directories ... NOTE
Found the following hidden files…
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With @zonia3000, we prepared a testing environment for HTTP data access that requires BasicAuth (i.e. username and password) authentication.
1. Prepare the following `Dockerfile`:
```
FROM ghcr.i…
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We will upload image files to the [Image Data Resource](https://idr.openmicroscopy.org/) and add URL and metadata information to the [Broad Bioimage Benchmark Collection](https://data.broadinstitute.o…
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Hi,
I woud like to know if you could add a method to easly read OME XML file from .ome.tif file. Because I really don't know what it the best way to implement it so I prefer to ask you directly. OME …
hadim updated
2 years ago
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From https://forum.image.sc/t/download-vsi-files-from-omero-fails/83314 .
Equivalent in Insight: https://github.com/ome/omero-insight/issues/188 which has been fixed https://github.com/ome/omero-in…