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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Feature Description
Algorithms Used
KNN Classifier
Logestic Regression
Decision Tree Classifier
Linear SVC…
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I would like to add a `anndata.merge` function, with similar functionality to `xarray.merge`.
## Example
```python
>>> expr_adata
AnnData object with n_obs × n_vars = 3000 × 15000
layers:…
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The PCs are no longer in order after upgrading to v.1.4.5.post1
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(just an idea, I haven't read anything specific about this)
Decomposition methods like PCA or Factor Analysis do not necessarily get the factors that are most important or explanatory in regression…
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Hello,
I have a question of how to do both data integration and batch effect removal. I have previously posted [this issue](https://github.com/satijalab/seurat/issues/8797) where they introduced m…
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Apologies for the naive question, but is it possible to perform PCA as described in the tutorials on a list of aligned (heterogeneous) pdb files rather than on a PDBEnsemble made from them?
Thank you…
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**Multilabel classification**
http://scikit-learn.org/stable/auto_examples/plot_multilabel.html#sphx-glr-auto-examples-plot-multilabel-py
**A demo of K-Means clustering on the handwritten digits…
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For **questions** about using SCENIC, please use the Discussions: https://github.com/aertslab/SCENIC/discussions/
> I am doing Scenic analysis, and my Anndata object does not have X_pca, while th…
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🐞 **Describe the bug:**
When running `biplot` on sparse models, the correlation vectors are showing as right angles. This only happens when `keepX` is specified.
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🔍…