-
Pyron, R. A., S. R. Ganesh, A. Sayyed, V. Sharma, V. Wallach, and R. Somaweera. 2016. A catalogue and systematic overview of the shield-tailed snakes (Serpentes: Uropeltidae). Zoosystema 38:453-506.
…
-
@MoralesCastilla @lizzieinvancouver mentioned you are trying to plot family names on the tips of your tree.
In case it is helpful, this is how I ended up labeling my tree in the end. I used the g…
-
When running automlsa2 and defining an outgroup, I get this error message. If I don't define an outgroup, the program works fine. Is it a user error or is there a flaw in the code? It does not seem to…
-
the standard should include some way to allow for multiple entries for a single agent (id) at different times. One way would be to have a 'sample_time' field which indicates the time when the data on …
-
**Is your feature request related to a problem? Please describe.**
Quantifying ghost ranges is useful for thinking about the sampling completeness of a dataset during exploration.
**Describe the s…
-
Lizzie decided the priors are too informative in the phylogeny model and @MoralesCastilla and I agreed to update them.
@MoralesCastilla Here's some updated results:
```
…
-
We should do a lit review of phylogeny papers that might be relevant to our manuscript!
I set up a file here:
docs/phylogeny/phenophylolit.csv
Can people add to it? And then we can assign people…
-
I should be in the toolshed.
Thank you!
-
I'm trying to create a custom RSV nextclade dataset following the tutorials from https://docs.nextstrain.org/en/latest/tutorials/creating-a-phylogenetic-workflow.html#annotate-the-phylogeny and https:…
-
---
Hello everyone. I wanted to plot a phylogeny tree thanks to ggtree R package. Yet, I have too many species (around 1000) and the graph is unreadable. Thus, I wanted to convert the plot into…