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Hi
I am forking the repo and am aiming to implement the possibility to add a manual threshold to the images.
The Autothreshold method is not useful in a lot of coloc experiments and fails in the ca…
lacan updated
7 years ago
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pombe fxn1 is picking up a mapping to cellular iron ion homeostasis KW-0409
I think to the best of current knowledge this protein is involved in iron-sulfur cluster assembly, it doesn't regulate th…
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After adding ~3000 files or so, `k2 add-to-library` fails with this error
```
+ k2 add-to-library --db k2mdb --file /avilpage.com/anand/GCF_001347155.1_7054_6_6_genomic.fna
Calculating MD5 sum for …
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### 🐛 Describe the bug
I am trying to inference a protein structure graph transformer model using PyTorch2 with rocm-5.4.3/5.5.1 on MI210 GPUs.
When I scale the batch size pass 250 per gpu I get…
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Hi,
I have binding sites of RNA binding proteins (RBP) analyzed from CLIP-seq data, so I want to do the motif enrichment and RBP-regulon prediction, which's used as input for SCENIC. How can I do t…
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We will initially proceed with our initial decision to split 'Predicted' (#21) from 'Experimental' (#34) Functional impact annotations - and model these as separate VA types. Our rationale was that:…
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Currently, ribosome GO:0005840 is_a intracellular non-membrane-bounded organelle
I know this could be debated, but I think that most researchers would call this a complex.
Could we move this unde…
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Follow-up from [Meeting 10](http://malaria.ourexperiment.org/osddmalaria_meeting_/8194/OSM_Online_Meeting_10_July_27th_2015.html): David Shackleford to examine the known _in vivo_ data in the series a…
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Can K * be used to study mutations for proteins in a single form (without any ligands)? Since the GMEC algorithm can not performs simultaneous mutation, but K* is able to do.
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Hello!
Thanks for developing this nice piece of software! I wonder if it is interesting for the developers to include nucleotides (DNA or RNA) into the monomer scope so that one can use ProjectRacc…