-
From @orbeckst in https://github.com/MDAnalysis/mdanalysis/discussions/4562
> Btw, I couldn't access the GLYCAM nomenclature link but I found it in the internet archive (http://web.archive.org/we…
-
Hey @janikkokot ,
I would like to use Topmodel from as a module from jupyter-notebook. I fiddled around with it, based on the info in the readme, but I did not really get it to work.
I did not r…
-
Hello,
Thank you for developing such a useful tool. I have some issues with some PDB entries (like 2hol). The pdb file has some missing atoms for example in U46 there is no base and the U residue i…
-
Since on Whitemane-Frostmourne Tailoring Cooldowns/location requirement for Ebonweave, Moonshroud and Spellweave are put back for what i assume to be economy-related purpose (should be up to ICC patch…
-
I found that 'root_3_xyz' has been used directly when converting vBAT back to Cartesian coordinates. Do the 'root_3_xyz's same as heavy atoms in residues? Does it mean the heavy atoms are fixed in rec…
-
Coot version 0.9.8.7.
Reproducing Error: Open Coot. Open a pdb. Go to a residue. Using the mouse, click "Change Residue's Phi and Phi", click the residue (I'm using the C on a serine, but I don't t…
-
Following up #668, `chem_comp_atom.alt_atom_id` is part of the internal CCD, but is not used to determine bonds yet. However some (especially older) PDB entries contain those alternative atom names. F…
-
I am trying to evaluate the effect of different chemical treatments against the mite Varroa in adult bees during a 56 days treatment period.
The sample for Varroa is taken from each colony, by sam…
-
| --- | --- |
| Bugzilla Link | [552853](https://bugs.eclipse.org/bugs/show_bug.cgi?id=552853) |
| Status | NEW |
| Importance | P3 normal |
| Reported | Nov 08, 2019 12:14 EDT |
| Modified | Dec…
-
Hello,
I would like to please ask if there is any way to modify the structure using an atom in the biotite? I know that the data of individual atoms can be accessed via indexing. For example, if I …