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**Describe the bug**
I have flashed XYZ onto a UZG-01 (ZigStar UZG) device. It is running as a Zigbee Coordinator in my network, and is connected to Zigbee2MQTT.
It is being powered by PoE.
H…
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Hi,
We found the Median GeneFulls per Cell in Summary.csv files of STAR Solo are higher than the one after we loaded into Seurat. Like we got "Median GeneFulls per Cell,3078", however, when we loa…
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Dear @alexdobin
This is not an issue but rather asking your thoughts about recent manuscripts about splice/unsplice/ambiguous read classification. I am sure you are reading on this but havent seen …
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We use STAR Solo to map results of CRISPR screens, specifically at one of the steps we map guide RNA reads that we have introduced and assign them to cells . For that we generate artificial reference,…
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The latest directions for star solo [currently recommend downloading cell ranger](https://github.com/alexdobin/STAR/blob/2.7.3a/docs/STARsolo.md#running-starsolo-for-10x-chromium-scrna-seq-data) in or…
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Dear Alex,
I am processing a large number (N>50 so far) of 10x libraries with STAR solo, each being divided across 8 lanes.
For the vast majority of libraries STARsolo runs just fine (and extr…
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```
force_g8_solos = True
would indicate to FoFiX that this custom song has solos marked on G8 but
has no custom overdrive sections marked -- so, use automatic overdrive marking.
```
Original issue …
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> cat PUMATAC_tutorial-main/PUMATAC/src/singlecelltoolkit/processes/barcode_correction.nf
nextflow.enable.dsl=2
//binDir = !params.containsKey("test") ? "${workflow.projectDir}/src/singlecelltoolk…
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Hi all, new to STAR (and single cell analysis) so sorry if there is an easy/obvious fix to this.
I downloaded SRA data and used fasterq-dump to extract fastq files (indrops experiment). I then gener…
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Hi Alex,
We would like to filter UMIs based on the amount of reads "supporting" them, is there any option to do it integrated into STARsolo? I could not find it. We were hoping to do it from the ba…