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Hi,
Firstly, thanks so much for making this resource- it is so helpful!
I had two comments/questions:
1) Some transcription factors, like Foxg and, are missing from your list (in that it does…
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I've created a "real-time" application with chunks of 3 sec using my own small fine-tuned model. It reads the complete audio call recording and generate 3s chunks, but in some cases I get repetition o…
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Thanks for your software!
I found that the final result of pyscenic is not the same as the result of scenic. In the result of scenci, the activity of each transcription factor is either 1 or 0; in…
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Dumb question... is there any easy way currently to display/add a progress bar to the Swift CLI, so you can get an estimate of how much time it'll take to complete a transcript?
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In
ExprFunc::predictExpr(...) (ExprPredictor.cpp)
we see at least one place where the code assumes that 'cic' will be factor number 2 (0-index, so the third in the factor_expression file.)
This sile…
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hello,
I use this command to set the font:
p("Cis-regulatory elements are regions of non-coding DNA controlling transcription regulation by binding to transcription factors"` , style = "font-fami…
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yeast DEF1 is currently annotated to transcription-coupled nucleotide-excision repair.
However,
pmid:23993092
"Like DNA replication, transcription is severely affected by DNA damage, with various…
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I am facing problem when I am running my own script. I have a gene expression file and a list of transcription factors. from this data, I made a prior file. But I am getting error as follows:
`Valu…
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1. [Integrating ChIP-seq with other functional genomics data](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5888983/pdf/ely002.pdf)
2. [2014-nature review-Identifying and mitigating bias in next-gener…
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Done when: access by ID, organism, transcription factor, sequence bias