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I am trying to use swinUNETR with the tutorial on swin_unetr_btcv_segmentation_3d.ipynb.
However, I am facing an out-of-memory error on Google Colaboratory's free GPU, and the notebook is not runnin…
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Hello, Im feeding the network data with size of [1,128,128,128] but I keep getting the following error: "RuntimeError: Given normalized_shape=[48], expected input with shape [*, 48], but got input of …
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**Describe the bug**
According to the paper, each transformer output should be processed by a residual block before concatenation with other features. However, for stage 3 the features are concatenat…
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Hello, I'm reproducing your code recently. I don't quite understand how to write the JSON file of brats2021. Can you upload a copy for our convenience?
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Implement DenseVNet to GaNDLF
https://niftynet.readthedocs.io/en/dev/niftynet.network.dense_vnet.html#niftynet.network.dense_vnet.DenseVNet
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6076994/
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Hi, thanks for the contributions to the scientific community.
Can we use UNETR for 2D images? I am trying to put the last channel = 1, but I think all the conv filters at the backend are 3D.
Do yo…
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The following bundles need to be updated into using MONAI 1.0.1 and Pytorch 1.13.0:
`brats_mri_segmentation` @yiheng-wang-nv
`lung_nodule_ct_detection` @Can-Zhao
`pancreas_ct_dints_segmentation` …
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**Describe the bug**
Currently we use a pre-defined pattern to include/exclude notebooks in the CI/CD.
https://github.com/Project-MONAI/tutorials/blob/f87bb12f1140962d415b83163143ba6f898904a0/runn…
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**Describe the bug**
ITK 5.2.1.post -> 5.3.0 may cause the following error in the freshly-built MONAI docker container.
```bash
2022-11-28 13:55:51,873 - INFO - set logging properties based on co…
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The issue keeps track on developing epistemic scoring for monaibundle app.
- [x] Create a scoring inferTask generater, `BundleScoringInferer` the scoring infer task should instantiate bundle models…