-
Hi
In you presentation "Statistical analysis for metagenomic data" on June 6-7, 2016, you have mentioned that
> Note: better to use metaphlan2 option:
> -t clade_profiles
> to generate normaliz…
-
Hi,
I have been trying to visualize the results from running fishtaco but while running the MultiFunctionTaxaContributionPlots function I get the following error:
Error in if (taxa_da[taxa_da$Ta…
-
Hi Diener,
would it possible to provide detailed description on the procedures that generated those GEM reference database? I found it quite useful while I am hesitating to use it in my manuscript wi…
-
Dear all,
In the past importing an HDF5 biom file would give a warning ("input string 1"...). This was not the case with a later phyloseq version (e.g. 1.42.0). However, now these warnings appear a…
-
Hi,
First of all, thanks for creating this tool. It seems very neat for crunching down picrust2 output.
I am trying to run `pathway_errorbar` function but getting the following error:
```
Er…
-
These mzML files:
[example_data.zip](https://github.com/chasemc/IDBacApp/files/10749336/example_data.zip)
are also available from here:
https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=7ce7…
-
-
We will implement apps to differentiate individual-level viz tools from population-level viz tools
Consider if we want more than 2 sections (ie, break the population-level viz tools into sub-groups…
-
Following tools missing: toolshed.g2.bx.psu.edu/repos/iuc/phyloseq_from_dada2/phyloseq_from_dada2/1.46.0+galaxy0
https://training.galaxyproject.org/training-material/topics/microbiome/tutorials/dad…
-
Provide more informative README for the repo:
https://github.com/AliYoussef96/LimROTS
You can check examples / ideas from here for instance:
https://github.com/microbiome/miaSim