-
I am trying to plot NMDS plot from microbiome data in phyloseq and I used below command, It is working perfectly, but here I used raw otu count for NMDS plot and the rank-threshold transformation is …
-
Hi,
I'm Assaf from IBM Research. We recently open-sourced our new implementation of the clustering algorithm, sequential information Bottleneck (sIB), and I thought that it could be a useful additi…
-
I'm here to suggest to H2O users and staff and Arno to consider a strategic feature suggestion. Big data streaming in deeplearning is going to be a great upgrade. However, it's not really enough to p…
-
I'm trying to figure this out myself, but no luck yet.
```
# test.R
library(philentropy)
m
-
Here are some ideas of what could be added to thaumic augmentation
**1) Flux Battery**
It works similarly to vis battery, but instead of vis it absorbs flux
**2) Flux Backpack**
Required for t…
-
iEat requires the evaluation of similarity between species. While similarity measurement methods can and will be implemented directly in the function, it may be a good idea to allow users to include a…
-
Hi,
I am obtaining negative values for DBCV scores for multiple clusterings I obtain by varying HDBSCAN hyper-parameters. It is my understanding this is impossible for HDBSCAN. Referring to the pap…
-
Hi, thanks for the nice paper and code.
As I understand it, the decoder function reconstructs the bulk RNA-seq input B from X (the predicted cell fractions). The learnt weights of the decoder func…
-
dear ,why the POINT+GCN train speed is so slow??
I want to know your train speed.
thank you.
-
sklearn provides a lot of functionality, we could use to simplify our code.
Distance matrix calculation:
https://scikit-learn.org/stable/modules/generated/sklearn.metrics.pairwise_distances.html
…