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The "otu_class_appr" and "otu_db" fields both seem useful for metabarcoding data (unless denoising/ASV generation was applied). However their descriptions are tailored to (viral)genomes. I suggest we …
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Structured comment name | class | Requirement | Item | Definition | Expected value | Value syntax | Example | Section | Preferred unit | Occurrence | MIXS ID
-- | -- | -- | -- | -- | -- | -- | -- |…
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## User Story
As a website user
I want to be able to quickly find a relevant MIxS term for a specific attribute
So that I can find appropriate terms easily
## Acceptance criteria
Given I am on …
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GenEpiO has a few **Specimen Storage Terms** that would fit well in OBIB. They are in a "data" tab in following Google sheet, in ROBOT table format, but we understand OBIB might not have that going f…
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I'm not sure when this was last updated but GOLD's last release of ecosystem pathways was in Sept 2023. I noticed this because value of `Peat` for column specific ecosystem does not validate and confi…
aclum updated
9 months ago
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Seems to flip flop between requiring a string and requiring an array of strings depending on sort order of config/mixs-tables-stage-modifications.tsv
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see other-reports/build-test-data-coverage-report.yaml
```yaml
optional_not_present:
- physical_sex
- soil_text_measure
- texture
recommended_not_present:
- soil_depth
```
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- submit sequences to NCBI
- submit occurrences to OBIS
Get insight from Diana's presentation.
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**Deliverable this task is associated with**
_See Deliverables tab here: https://docs.google.com/spreadsheets/d/1jF1RU_TwQlJpqvHnKk-KieE6VlUv0je4eFddK9idPuE/edit?usp=sharing_
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**RACI**
…
aclum updated
9 months ago