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I'm currently working with NanoString GeoMx ome.tiff whole-slide IF images containing the following four channels: FITC, Cy3, TexasRed, and Cy5. Ideally, I would want to use MCMICRO as the end-to-end …
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Hello, Your experiment is Ubuntu？my expereimen is Windows+tensorflow_GPU, but it occurs error when I run the retinaNN_training.py：
`Traceback (most recent call last):
File "D:/Study/CODES/Medical_…
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Hi,
I'm trying to reproduce Your results in instance segmentation, using the scripts that you delivered (train_maskyolo_step1.sh and 2). I did everything according to the instruction. The scripts wor…
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To implement the data fetching module (Source/shared_utils//prep_training_data.py), the segmentation and classification children classes were put together based on open source code. As a result, there…
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Hello,
I'm a bit confused by class_weights parameter in loss functions. For instance, in JaccardLoss description it says:
`class_weights: Array (``np.array``) of class weights (``len(weights) = nu…
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When running local pure python with `python main.py -- train_evaluate_predict --pipeline_name unet --chunk_size 5000` , the following error occurs, any help?
> neptune: Executing in Offline Mode.
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https://github.com/nii-yamagishilab/ClassNSeg/blob/87e506fddb9f36ef14f9bd1f6496f86d7faef0fd/train.py#L382
As is shown in #L382, labels participant in segmentation. When I change label from [1,0] to…
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I meet this issue when training the Multi3DRefer within 2-3 epochs,how can I resolve this issue?
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Have you considered also supporting DAVIS2016 exclusively? Mostly because of the single object segmentation. I managed to adjust the code, appending the diff in case anyone will need it. I can also do…