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Running woltka classify as "Step 2: stratified functional profiling" with preserved --outmap in first woltka classify for taxonomy and got this error:
cat ~/plasma_woltka_strat-1.e1315562
Tracebac…
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https://docs.google.com/spreadsheets/d/17mEGpZC7jv5AngeQFqKiE7fUiZKjdBNpBnbEsAyEtEc/edit#gid=0
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Shotgun sequencing of the vaginal microbiome reveals both a species and functional potential signature of preterm birth – Conor Feehily et al. – npj Biofilms and Microbiomes 2020
DOI: 10.1038/s41522…
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Hi,
Not sure if this is a bug since the package is new or just an error on my end. I'm trying to use function mvgls to fit a pgls model but get the error "Error in svd(B, nu = 0) : infinite or mis…
MKeao updated
8 months ago
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![image](https://user-images.githubusercontent.com/91985721/161055902-eb4c9e68-7e9c-494b-bda9-55a2fedcb42f.png)
I'm hoping this recipe will be a hit with the balsamic sauce + veggies
**INGREDIE…
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Hello everybody,
I have a small issue which is probably just a rookie mistake. I have a dataset of vaginal microbiota; Illumina HiSeq sequencing was performed, I have run the Dada2 pipeline, and m…
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It would be helpful for our use case to have a list of the groups and subgroups of the bib-entries in the menu in the left side frame of the bibtexbrowser similar to jabref (see pic below).
![group…
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Dear authors,
I have been using Bracken to experiment on strain level classifications. I find the tool very useful. I do have a question regarding output. I test on reads from a gut microbiome stan…
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https://github.com/microbiome/OMA/pull/562
All packages should be in format \`package\`, all functions should be in format \`function()\` and all slots should be in format \`assay\`.
Now the boo…
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# Key Question
>
> What is needed for working data structure initialization? Why isn't it working?
>
>The node and edge list and prioritization or
> sort strategy for edge representation, we…