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Link to the paper: [Predicting Yeast Synthetic Lethal Genetic Interactions Using Protein Domains](https://ieeexplore-ieee-org.tudelft.idm.oclc.org/document/5341871)
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Work on story 165 has revealed serious questions about the quality of the Birth Chapman Code field
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I have done, from a clean R 3.2.0 (x64 Windows 8) installation:
> library(caret)
> data(iris)
> iris2 mod1 defaultSummary()
Error in defaultSummary() : argument "data" is missing, with n…
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Hi again Renato,
Were PI-RADSv2 scores or otherwise (blinded to Gleason score) assigned to the lesions during the contouring exercise? If yes, would be very helpful to have them released.
Many t…
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@simongraham Hi. Thanks for helping with displaying the hover-net nuclei segmentation result.
We evaluated the hover-net performance on TCGA and our own dataset. The performance of nuclei segmentat…
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Is it possible with `mlr` to tune the probability threshold for classification using nested cross-validation? In the tutorial on cost-sensitive classification the function `tuneThreshold` is briefly e…
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Hi Henrik,
I ran a GLMM and found several significant interactions including:
```
m17 0.988 - .911
# [1] 0.077
> .951 - 0.874
# [1] 0.077
```
The second method that I tried was using od…
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For various functions within the Analysis GUI, the user needs to specify the cluster index (when performing individual cell analysis). This can be confusing as the user needs to know beforehand what t…
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## Description
- While reviewing the FOQUS test suite setup yesterday with @ksbeattie, we realized that `test_start_gui`, one of the tests in `foqus_lib/unit_tests/test_foqus_main.py`, fails
- Thi…
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Hello! I am trying to benchmark the different peak callers typically used to find ATAC-seq peaks. I've ran into a bit of trouble replicating the results in the HMMRATAC paper and am trying to figure o…