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Meeting time: Tue Oct 5th 2pm London
Location: https://ucl.zoom.us/j/98356058106
Recording: https://youtu.be/6hqsapouJEU
Meeting follows on from #49 and #50
Mur ligase minutes
1) Laura XChem …
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Just ran a ["what may treat T2D" on test](https://ui.test.transltr.io/main/results?l=Type%202%20Diabetes%20Mellitus&i=MONDO:0005148&t=0&r=0&q=4726a165-1a3d-47f5-a9dd-fe8ba4c0e120) and was surprised to…
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As a followup on my PR #1709, there were tools in workflows I could not attach the correct tool_shed_repository to:
Topic | Tutorial | Tutorial name | Tutorial file name | Tool name [Tool id] t…
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## Overview
Although Series 4 is the current _de facto_ series of interest, there seem to be some open questions regarding series 3 (S3). For example, it is still unknown which target is hit by se…
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Hello,
Thank you for creating this tool, it's been very easy to get using following the documentation. Would you be able to write a bit on how best to interpret and use the prediction results? In …
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I am having an issue with running braker3 unable to continue after not being able to find the transcripts_merged.fasta.gff file. Using the test files go past the GENEMARK-EX step so I know the .gm_key…
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We need a new CLI analysis tool (which can also be run via the Python API) to analyze simulations set up via the perses CLI.
It should provide three major outputs:
1. **Optimal predictions:** The …
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I just installed TFBMiner and was very excited to use it on a list of compounds that I had, but I ran l-arabinose (C00259) as a test to see if it would run properly but I got zero hits. I assume that …
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Paper: https://www.nature.com/articles/ng.3862
Lots here to capture, someone will need to get into the supplemental data and try to track some of this down.
- Genome and annotation - 391 Mb of …
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**Are you using the latest release?**
1.8.11
**What command did you issue?**
funannotate annotate -i update_results -oannotated --eggnog $emapper_annotations --iprscan iprscan.fasta.xml --cpus 10…