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When implementing a circuit with AraC, the error
"Error using regexp
All cells must be char row vectors.
Error in txtl_protein_AraC (line 68)
p = regexp(listOfSpecies,'^protein AraC(-lva)?$'…
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Hi, great tool!
To make it even better, it would be nice to also support protein level result export to .txt/.tsv, as is implemented for the peptide level table.
at least pFind.protein cannot read…
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Currently we have gene/protein conflation.
The ability to handle other types of conflation is partially implemented. Specifically, the backend parts are probably reasonably close, but we don't hav…
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It would be very useful to add a parameter "Ontogeny like" to the proteins that would store this information:
![image](https://user-images.githubusercontent.com/25903040/233312477-7d71e7be-c823-4c5…
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from the paper I see that you first embed text with text-embedding-3-large, then you use your trained projection network from the contrastive learning.
Can you also release the pretrained text proj…
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Hi,
Is there a way to run openfe for membrane protein targets?
Thanks,
Wenchang
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Why do I get an error running protein_mpnn_run.py saying there is no chain_set_test.jsonl file in the root directory?
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Hi there! I'm new to Pymol and I've been using it to visualize protein interactions. I saved my session as a .pse file. However, every time I reopen the saved .pse file, I'm having an issue with the p…
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hello
it seems that something weird is going on since we just created safety sheets with samples starting W under MX415 and you can see that there are multiple proteins created in the database. does …