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I have been thinking about how to make all of the `taxa` classes most useful and I think I have come up with a way to reorganize things that will make things more natural and R-like, while increasing …
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Hi.
While the book makes it very clear how to create a multinomial logistic (softmax) regressor instead of the default composite model based on several OvR binary logistic regressors in the multila…
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[@dosumis this ticket makes points that you have been making for a decade, apologies if this duplicates an existing ticket, I didn't see one and thought to start one fresh]
In general CL follows se…
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Hi,
I need some clarification regarding the unclassified reads, and how to classify reads when my species is not present in the database.
I have sequenced the genome of a green alga (Chlorophyt…
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A question from Amber Saundry at UBC:
For the DwC term scientificNameAuthorship – this should be the authorship of
the lowest rank. However, what about when there is an subspecies/variety/forma …
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Hi,
Thanks for developing the tools. It looks great. I was wondering if there is any way of visualizing the results using Pavian or Krona as it does for Kraken reports.
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This is a companion issue to:
- #1443
But that issue focuses on **injection** which I define as adding axioms **about** terms another ontology (this is clearly defined in that issue, don't brin…
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Ideas of other polygons we could add to the geocoder:
* Oceans, water bodies -- Marine Regions could supply this
* Protected areas
* States (US, Canada, Russia, China, Brazil, Australia especiall…
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Dear Sabrina and Nico
I have created a form to facilitate submission of OMIA data to Mondo.
Google Sheet
https://docs.google.com/spreadsheets/d/1L3wnp83F-YCKUpBMVBVv1fjHqU0Rw1g58AjvpE24owA/edit…
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https://data.catalogueoflife.org/dataset/2284/taxon/856H3
from worms.
Should we blacklist "Palaeozoic" as a name part or can it be a genuine name?