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Hi I was trying to run the `transfacpred` and I get the following error:
```
transfacpred -i subset_1455.fasta
-o transfacpred_res -d 2
#####################################################…
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I write this here as an issue, because in some parts it is an issue. But some parts might be considered an idéa or change request. And both these seems to be inherited from the original kartapullautin…
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Hello,
I encountered following issue:
I created my own adata object with 4 perturbed transcription factors:
my perturbations are not in the GO graph. how do I fix this.
Here is the code
from ge…
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Hi Team,
From my understanding, it is possible not to specify genes in the plot_gene_trends function. In the tutorial, you guys already used known genes for your data but I want to discover unbiase…
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Hi, I encounter the same problem as in https://github.com/facebookresearch/LAMA/issues/10.
And I found the reason why 2 examples are filtered is that the `obj_label` are `1970s` and `1990s`. And in `…
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We have made our own guidelines for annotating signaling pathways in FlyBase for the Pathway Pages.
[FB_Pathway_Curation_Manual.pdf](https://github.com/FlyBase/GO-curation/files/8190482/FB_Pathway_Cu…
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An answer to the question.
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Hi @srengel @ValWood
GO:0000196 cell wall integrity MAPK cascade is currently defined as 'A MAPK cascade that contributes to cell wall organization or biogenesis.' We have found newer reviews that…
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https://mp.weixin.qq.com/s/zoGbxOCOloD-hS-OGEgMjA
ixxmu updated
5 months ago
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Hi,
Thanks for making Seurat and Signac available for anyone to use! It makes single-cell seq analysis accessible, even for beginners.
Recently I performed differential accessible peak analysis…