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Thanks SO MUCH for working on this repo. We are definitely appreciative of all the work.
I am reviewing the inference code for fMRI and I think there are a few key differences with how the network…
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Hey,
So this happens after I have established my service using the C++ SDK with Unreal Engine.
When i am creating the brain using CreateBrain(BrainName.c_str()); which in turn invokes CreateBrainInt…
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Hi Johannes,
Hope you are well! I have encountered some issues with the inverse transformation unfortunately and was hoping you could please assist. I am currently aiming to analyse irradiation-inj…
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HI @akcarsten,
Thanks for explaining everything so easily, I tried the code you have provided to understand the nature of different fMRI dataset., mentioned below.
1. (http://www.cs.cmu.edu/afs/cs.…
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In the mriview.js and mriview_surface.js of webGL viewer, Is there any variable can be change the opacity of main brain surface?
The transparency menu of UI only seems to change the data overlaid on …
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Hi there, I got an error when I try to use read_trk_to_fg script.
I use mrTrix3 ge…
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Hello,
I have question.
In brain_dataset.py, image was shifted and then normalized: npImg = (npImg+100) / 1000
Why did you do this specifically?
In my dataset, lowest value= -160 and highest va…
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# Co-ordination with Nelson/Jeremy
## Cell type ontology descriptions
- [ ] #20
- [x] #22
- [ ] Alida to generate spreadsheet with BG taxonomy node name; CL label, CL symbol; CL description; CL ref…
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Hi @oesteban and @eilidhmacnicol ,
I was curious what the status of nirodents is. I've been spending much of my day looking for a good masking strategy for some mouse data and I came across the OSF…
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## Summary
Add option to enable self-definition of brain mask.
Previous version uses the brain mask generated from fMRIPrep. However, in some cases, the brain mask is not accurate. It is better to a…