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A new user who will come to the site will also generate data. The prediction will tell that there is any breast cancer or not and after knowing the actual result we can append that data to our Breast …
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Something annoying:
```
import numpy as np
import pandas as pd
from sklearn.datasets import load_breast_cancer
from sklearn.linear_model import LogisticRegression
from sklearn.inspection import …
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Survival analysis (Cox regression and ggforest plot)
- 25 different tumors and no cancers
- PTV burden as a continuous variable
- Variables in the Cox models: sex, ethnic group, PCA1-10, PTV burd…
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Xeroderma pigmentosum is a disease based on the body not being able to properly respond to UV damage. That ends up leading to lots of skin cancers. But if you focus on the upstream part of the sys…
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Hi authors,
Thanks for the great work. If possible, could you share the manual annotation file for two 10X datasets with me (Figure 3A left and Figure 5A left)? Thanks!
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**Background**:
cBioPortal is an open-source platform designed to provide a web interface for exploring, visualizing, and analyzing cancer genomics data, and has grown to be widely used by researche…
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Hi. Thanks for your great work! May I ask you a question？
run: BiGraph Applied to Breast Cancer.ipynb
result: Did not run as expected results, the reason should be missing the file “fitted_so…
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### Issue description
There are entries in the Drug Dictionary (e.g. [FU-LV regimen](https://www.cancer.gov/publications/dictionaries/cancer-drug/def/fu-lv-regimen) - concept C63388) where the "Check…
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disease clinical classification / disease molecular classification.
Dependant on the type of disease (in the disease column), i.e. "breast cancer", "lung cancer" etc.; after 11/15, will work further …
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Listed are the HTAN manuscripts we should curate for cBioPortal:
- [x] -An omic and multidimensional spatial atlas from serial biopsies of an evolving metastatic breast cancer (https://pubmed.ncbi.…