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**High-level Question**
Find phenotypic profiles (characteristics) associated with environmental exposures within a [cohort]
**Specific Instance**
Find phenotypic profiles associated with environ…
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```
What steps will reproduce the problem?
1. I run blastp separately for every strains as following:
ncbi-blast-2.2.29+/bin/blastp -evalue 1e-05 -outfmt 6 -query 0001.fasta -db
genesOfAllStrainsDB…
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Some targets were aligned to the wrong xtal chain and therefore received bad RMSDs. Something probably went wrong during chain splitting/permutation/alignment.
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Hi ,
I use GeMoMa to perform homolog-based gene prediction.the output of the software is as follow:
![图片](https://user-images.githubusercontent.com/52643750/69475687-06d0d580-0e0b-11ea-9255-fcbe1948…
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The schema has inline docs detailing the mapping but we should provide a higher level guide. I will sketch out in this ticket and then this can be turned into docs on the site. I'm doing quickly so if…
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hi,
when I run the command `./CAT_pack/CAT contigs -c "/home/jiaojiao/cat/test.fasta" -d /home/jiaojiao/cat/CAT_prepare_20210107/2021-01-07_CAT_database/ -t /home/jiaojiao/cat/CAT_prepare_20210107/20…
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Title: Learning the language of viral evolution and escape
# General Information
## Please paste a link to the paper or a citation here:
Link: https://science.sciencemag.org/content/371/652…
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A way to enable stereoscopic mode for jupyter notebooks? For example: two parallel (side by side) views for left and right eye; cyan/red; interleaved; etc.
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I tryed to test CHERRY using my phage genomes, but encountered some issues.
Firstly, in the paper of CHERRY, it is mentioned that the top [n] results with a score>0.9 can be used as predictions for…