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i intend to use the schaefers atlas from nilearn (datasets.fetch_atlas_schaefer_2018(200)) to construct my FC matrices. I see that the downloaded atlas template has the filename of "Schaefer2018_200Pa…
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I've used the neurolibre template to prepare a new submission.
The repo is here:
https://github.com/pbellec/editorial_parcellation
The jupyter book is in `content`.
I have tested the submission…
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We've been having an issue where qsirecon jobs run indefinitely, even after qsiprep exits. I ran `ps` after calling `singularity run`, and it seems that an xvfb process persists after singularity exit…
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* resector version: 0.2.9
* Python version: 3.7
* Operating System: Linux
I am trying to use the resector.resect() function in python, where I want to cache all the inputs on beforehand (I need a…
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**Submitting author:** @tsalo (Taylor Salo)
**Repository:** https://github.com/NBCLab/nimare-paper
**Editor:** @pbellec
**Reviewers:** @agahkarakuzu
**Jupyter Book:** http://neurolibre-data-prod.c…
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Following on the suggestion by @Lestropie (this [commit](https://github.com/sina-mansour/UKB-connectomics/commit/debd48665b25927b52bbce7b0b1bd73c0e3e7f8c)):
RS: 5ttgen freesurfer is probably the be…
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version/commit: v2.2.3
to reproduce:
1/ go to
expected behaviour:
waxholm v3 selected, dentate gyrus selected
actual behaviour:
on some machines, dentate gyrus not selected, instead…
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The nd-ecog extension, using [this schema](https://github.com/catalystneuro/ndx-ecog/blob/master/spec/ndx-ecog.extensions.yaml) has an error when reading an NWB file.
```matlab
>> nwbRead('/Users/…
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Update the registration.sh to work with the NENAH-BIDS.
Use the appropriate T1w that has been FreeSurfer segmented.
Use the routines on mrtrix wiki to transform FS parcellation into 5TT.