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My goal for this homework is to develop on my skills of using Bash as well as add additional bioinformatics tools to my toolkit.
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# Title
Integration of open-source AI models in Galaxy (web-based scientific data analysis platform)
# Description
[Galaxy (Europe)](https://usegalaxy.eu/) is a web-based, open-source data anal…
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**Submitting author:** @Juke34 (Jacques Dainat)
**Repository:** https://github.com/Juke34/AliNe
**Branch with paper.md** (empty if default branch): main
**Version:** v1.0.0
**Editor:** @jromanowska
**…
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Dear,
I am currently utilizing the Mime1 package for my bioinformatics research and have encountered an issue with the ML.Dev.Prog.Sig function. Specifically, the following code results in an error…
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## Work to Replicate
DOI: https://doi.org/10.1093/bioinformatics/bty584
Bioinformatics Link: https://academic.oup.com/bioinformatics/article/34/17/i927/5093222#supplementary-data
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Hi @geraldinepascal,
I’m excited to use the FROGS workflow v5, but I’ve encountered several issues during installation and running the workflow on my laptop (local machine) and a SLURM server usin…
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Many tools in bioinformatics provide a multilinux binary, which is a very convenient solution: very simple and reproducible installation, binaries are quite small anyway (and if they were big - networ…
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One comment: it might be nice to also provide an Excel template for the data (complete with dropdowns for controlled vocabulary). Excel is, sadly, the most used bioinformatics tool on the planet :)
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Thank you for your work to help train/fine-tune AF2/OpenFold/pLMFold models.
I tried to run pLMFold's training using my own protein datasets, but couldn't figure out how proteins' tfrecord data can…
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**Discussion topic:** How do we best meet the needs of student training for bioinformatics? How does this education change depending on whether we are talking about graduate vs undergraduate, or acade…