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geraldinepascal
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FROGS
FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.
GNU General Public License v3.0
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NA in Function Hierarchy in Picrust2 Frogs implementation
#71
LafontRapnouilTristan
opened
2 months ago
1
shorter and faster test for gzip files
#70
frederic-mahe
closed
10 months ago
0
Typos
#69
frederic-mahe
closed
10 months ago
1
Dev
#68
mariabernard
closed
1 year ago
0
"Normalisation by random resampling" running time
#67
Joebio
closed
1 year ago
2
Update RELEASES_notes for 4.1.0 release
#66
mariabernard
closed
1 year ago
0
Error while preprocessing
#65
pyrosilesl97
opened
1 year ago
2
Fix #63. Tweaks to visualisation vignette for deseq2 results:
#64
mahendra-mariadassou
closed
1 year ago
0
deseq2_visualisation fails when there are no differentially abundant OTU
#63
mahendra-mariadassou
closed
1 year ago
0
manual of possible commands (and possible parameters)?
#62
marwa38
closed
1 year ago
5
Dev
#61
vindarbot
closed
2 years ago
0
Problem with asscii encoding at the affiliation_filters.py step
#60
EEhydreka
closed
2 years ago
4
Error in read_biom(biom_file = BIOMfilename)
#59
najouamghazli
opened
2 years ago
2
Dev
#58
vindarbot
closed
2 years ago
0
change import
#57
vindarbot
closed
2 years ago
0
Dev
#56
vindarbot
closed
2 years ago
0
Dev
#55
vindarbot
closed
2 years ago
0
Barcode file for 454 data
#54
najouamghazli
opened
2 years ago
2
phyloseq_composition.py script fails
#53
ahorvath
closed
3 years ago
2
add try except to handle open file limit
#52
mariabernard
closed
3 years ago
0
Filtering step removed
#51
even4void
closed
4 years ago
3
test.sh fails in FROGS docker container
#50
cjuigne
closed
4 years ago
2
Structure visualisation error
#49
reemelkabbout
closed
4 years ago
2
FROGS status with recent version of external tools
#48
EricDeveaud
opened
4 years ago
4
FROGSSTAT Phyloseq Import Data.
#47
reemelkabbout
opened
4 years ago
5
Update of Unite (databanks/assignation)
#46
anlebreton
closed
4 years ago
2
RDPTools installation problem
#45
JeremyTournayre
closed
4 years ago
2
tree.py not working with Galaxy
#44
loraine-gueguen
opened
4 years ago
5
r_import_data.py on custom data set
#43
ahorvath
closed
4 years ago
5
Custom database - No more "dirty toad"?
#42
Toliman06
closed
5 years ago
1
Question: itsx.py --input-count
#41
Toliman06
closed
5 years ago
1
Typo error in INSTALL_from_source.md
#40
Toliman06
closed
5 years ago
6
Wrappers moved on geraldinepascal/FROGS-wrappers
#39
ValentinMarcon
closed
5 years ago
0
Test FROGS-3.0.0 problem
#38
najouamghazli
closed
5 years ago
11
FROGS 3.0.0 install - ITSx 1.0.11 install
#37
Toliman06
closed
5 years ago
1
FROGS 3.0.0 install - PEAR install
#36
Toliman06
closed
5 years ago
2
Added https:// to all javascript and css links in all html templates …
#35
Slugger70
closed
5 years ago
0
FROGS html reports don't work on secure servers (https)
#34
Slugger70
closed
5 years ago
2
Error testing on Frogs
#33
jzegarrav
closed
5 years ago
1
IMPROVEMENT - Assignation databank descriptions
#32
Toliman06
closed
6 years ago
1
How to add "rdata" datatype into galaxy ?
#31
inestiouiri
closed
5 years ago
7
FROGS Tree Reconstruction of phylogenetic tree issue
#30
mariemh23
closed
5 years ago
11
Database format?
#29
Toliman06
closed
6 years ago
6
test execution problems
#28
Toliman06
closed
6 years ago
21
Error in preprocess execution
#27
najouamghazli
closed
6 years ago
8
Modify galaxy XML wrapper to handle GALAXY_SLOT variable
#26
laure182
closed
6 years ago
1
test failed
#25
nagoue
closed
6 years ago
8
Access to the web
#24
mahendra-mariadassou
closed
5 years ago
1
incorrect separators in test samplefile
#23
mahendra-mariadassou
closed
6 years ago
0
behavior of plotly
#22
mahendra-mariadassou
closed
6 years ago
1
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