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**Is your feature request related to a problem? Please describe.**
If you have a tag and a branch with the same name, there is only one Dockstore version for it. The Dockstore version will be updated …
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```
Usage: client [options] [command] [command options]
Options:
--config
Config file location.
Default: /home/dyuen/.dockstore/write.api.config.properties
--help
Pr…
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This seems to have problems with the CWL 1.0, possibly because it doesn't like the switch from #id to the new map style parameters.
Replicate with https://github.com/dockstore/phylowgs/blob/master/…
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## Feature Request
Add the ability for CLI to rewrite the default docker image url to point to a local mirror.
This is specifically to enable use of local docker registry pull-through mirror which …
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**Describe the bug**
Due to the nature of this bug I can't be sure if it still exists in 1.10.0, but it does exist in 1.9.0 so it might be worth looking into. Basically, when using Dockstore's recomme…
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Inspired by dockstore
- transformation of osparc graphs standard DAGs
- workflow compilers?
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Please select a course from the following list that is appropriate for your role and one that you have not previously completed.
https://docs.google.com/document/d/11JZlwNppGfjAkYVHnD_bgQIzk7_Rn5sL…
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## Feature Request
### Desired behaviour
> Why are there separate endpoints for the collection's description? There is already an endpoint for updating the collection as a whole. Not saying we shou…
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- [ ] instead of pulling the latest docker images, we should use SHA, and ideally tags, to ensure the same version of the image is used
- [ ] workflows currently refer to the notebooks from "main" br…
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https://github.com/cancerit/dockstore-cgpwgs/blob/develop/examples/cgpwgs/bam_bai.json is missing references to a .bas file