-
Not clear if this is an issue for our team. If inapplicable, please comment.
The G2P schema contains two classes with the same name as classes in SequenceAnnotationMethods
One in the file genotypep…
-
For example, from the server test data:
```
va.transcriptEffects[0].hgvsAnnotation.toJsonDict()
```
gives
```
{u'genomic': u'1:g.46286_46288delTAT',
u'protein': u'',
u'transcript': u'n.46286_462…
reece updated
7 years ago
-
Some useful subset of gencode should be added to the example data. This will require:
- [ ] editing the gencode gff3 mapped against grch38 to select a subset of genes and their children
- [ ] munged u…
-
What are folks opinions on RST vs. markdown? I think they perform the same functions but I personally find markdown easier to write.
There is probably a way to edit it on the docker side, but you c…
-
See this [doc](https://docs.google.com/document/d/1L5uHcQKcC1kdcCB14ixVaJIodYDZbjH0GekLcDyS8TE/edit#) for reference (from July deliverable)
See the [Google folder](https://drive.google.com/drive/u/…
-
We need to evaluate [DRS ](https://ga4gh.github.io/data-repository-service-schemas/) for the array repository and GlyGen. It may become an implementation target for CFDE base award year 3.
@jeet-vo…
-
After the first response has returned true, any subsequent requests where no matching variants could be found, still return true.
After looking through the code, it turns out that the problem has t…
-
Rebrand open-source implementations we control to Data Connect.
-
Update `tests/unit/test_protocol_errors.py``to test all search endpoints. Run the tests using``nosetests -vs tests/unit/test_protocol_errors.py``.
- Remove the TODO comment, and the check requestClass…
-
It looks like this is [specified here](https://github.com/ga4gh/data-repository-service-schemas/blob/7b8e94d01b72f4fbaa96fdddfb14c8e71420ce50/openapi/data_repository_service.swagger.yaml#L320) in the …