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[Enter steps to reproduce:]
1. ...
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**Atom**: 1.46.0 x64
**Electron**: 4.2.7
**OS**: Mac OS X 10.14.6
**Thrown From**: [hydrogen-python](https://github.com/nikitakit/hydrogen-python) p…
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Here, I list the features that are considered to be added in the future.
## Features must have
- [ ] display as a HTML file
- [ ] add text
- [ ] high order bond
## Features nice to have
- …
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Currently, in the water bridge analysis module, the user needs to give the name for the hydrogen bond donor heavy atom and the hydrogens were found via a simple distance search. I'm interested in usin…
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### Prerequisites
* [Y] Have you checked the solutions in our [troubleshooting guide](https://nteract.gitbooks.io/hydrogen/docs/Troubleshooting.html) for common problems ?
* [Y] Have you checked t…
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Thanks for you opening our source code and the fantastic works.
I have a few questions I’d like to ask.
Firstly, the protein-ligand complexes in MISATO likely come primarily from the PDBbind dat…
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Argument to `path.dirname` must be a string
```
Object.dirname (/Applications/Atom.app/Contents/Resources/app/src/electron-shims.js:9:10)
Object.getCWD (/Users/eacabbi/.atom/packages/hydrogen-launc…
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Which module is this Interactions class dependent on?
`interactions = Interactions()`
http://www.bahargroup.org/prody/tutorials/insty_tutorial/insty_tutorial.pdf
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Hi.
I superposed 5 pdbs mutated on positions 1, 45, 67. The idea is to superpose the backbone structures and highlight the **sidechains** of those 3 positions only. For this i'm using 2 representat…
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**Describe the bug**
I searched Butylamine
After import, carbon shows up
![image](http…
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From the MDL specs:
"Number the atoms surrounding the stereo center with 1, 2, 3, and 4 in order of increasing atom number (position in the atom block) (a hydrogen atom should be considered the hig…