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Hi, thank you for the great package!
I have bulk RNA-seq data of two cell types, in two different conditions, so I am creating one cellchat object per condition.
I am using the normalized count data…
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cramg updated
3 years ago
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**MCATS Questions Focused on Molecular & Cellular Physiology**
**1. Major histocompatibility complex (MHC) refers to a large group of genes that code for proteins that play an essential role in whi…
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Ultimately, the value of the LS model is to identify when Gas6 and PROS1 operate differently, either alone or when present in combination. If we identify cases where these behaviors take place, they c…
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We have a PHI-Canto curation session where we need to annotate 'pathogen-derived receptor ligand activity' (GO:0140295) with the 'binds' annotation extension (see [here](https://github.com/pombase/pom…
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### Bug summary
Hi everyone,
I am trying to run gmx_MMPBSA on a DNA-aptamer-ligand trajectory obtained in Gromacs using the CHARMM ff. I successfully ran the calculations using the complex trajec…
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![企业微信截图_17125646938961](https://github.com/jinworks/CellChat/assets/61814039/4e33b8ca-5287-43b7-9ea6-8073614ae608)
In the tutorial (https://htmlpreview.github.io/?https://github.com/jinworks/Cel…
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Hi,
https://github.com/wguo-research/scCancer/blob/3f9eb9e878531d588594a132f00d60d6d38506c8/R/scAnnotation.R#L1325-L1326
Here it uses the 'counts' slot , i.e., UMI, to estimate the strength of l…
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Hi, First thanks for the nice tools.
I would like to use CellChat on zebrafish data. I understood that I have to modify the database and replace human gene name by zebrafish name. I have a table wi…
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### Issue summary
I want to execute covalent docking based virtual screening followed by ROC/enrichment / validation experiments
### Steps to reproduce
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I am unable to understand few things …