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In the config file, `nJobTypes` specifies the number of target likelihood functions. This comes in useful when the likelihood can be broken into multiple parts, which are potentially evaluated on sepa…
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See how likelihood and fitting functions deal with edge cases of all zeros, write tests, and fix so that they don't crash.
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This is not exactly an issue but a question about usage. Sorry if this not the right place for it - I did email the mailing list gpy-users@lists.shef.ac.uk about a month back and received no response …
Riksi updated
7 years ago
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It's probably past time to add things like unit tests, just to make sure changes aren't breaking things like the likelihood functions or data reading or etc.
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Hey David,
Here is a simplistic approach you can use to get at goodness-of-fit.
https://github.com/weecology/mete-spatial/blob/master/scripts/spat_functions.R#L3341
There are of course many other …
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## Severity
**Impact:**
Medium, because a protocol can be broken and the code could give a false calculations
**Likelihood:**
Medium, as it can be gamed but it needs compromised / malicious ow…
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Some issues can cause likelihood to always be zero - want to return an error if this is the case or if other things look off about it.
The time aggregation functions in inference fail if the data is…
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We currently rely on a lot of custom code that only appears in `sample_maps.py` for doing the sampling. This is not good. So for instance, if a user wants to sample a map in a notebook, they have to r…
EiffL updated
3 years ago
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## Description
Provide basic support for an integrated Laplace approximation.
The motivation is to handle hierarchical models with a latent Gaussian model of the form
$\eta \sim p(\eta)$
$\theta…
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`pspecmodel` is intended to serve as an interface between data measurements stored in `uvpspec` objects (and assumptions about their likelihoods) and theoretical models.
To start, we should decide…