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### Available datasets
- [x] **merfish**
- [x] **mibitof**
- [x] **nanostring**
- [x] **toy/artificial dataset**
- [x] **visium**
### Missign datasets
- [ ] maldi (from metaspace, see link i…
giovp updated
4 months ago
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add more instruments.
```
#!/bin/bash
SCRIPT_DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null 2>&1 && pwd )"
ROOD_DIR="$(dirname "$SCRIPT_DIR")"
PYTHON="${ROOD_DIR}/env/bin/python"
…
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Hi
I have build a singularity image from DIANN docker image v1.8.1
I have run sucessfully on a single sample diaNN. See execution log and submission:
[diann-singlesample.slurm.log](https://git…
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Great work! I use cytoviewer for MALDI-images with larger pixel sizes, e.g. 5, 20 or 50um. Is it be possible to implement a feature where I can input a custom and the scale bar value is adjusted? Woul…
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Hi,
I am using `MALDIquant `extensively to process MSI datasets. These datasets tend to be extremely large (
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### Basic information
I want to analyze data from UPLC-Q-exactive-Orbitrap and by imaging MS data with mzmine3.
Imaging MS data was collected from MALDI 7T FT-ICR mass spectrometer SolariX XR e…
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Dear developers,
I recently discovered your development initiative for Mass Spectrometry and I can only congratulate you for the amount of efforts put into these improvements!
I'm not an expert i…
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~~Since we are making `dataset_type` required field on Dataset and Publication at entity creation time, the validator for `Publication.dataset_type` at both creation via POST call and update via PUT c…
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### Describe the new term or terms you would like to add.
I would like to suggest the following new term additions for the [Thermo Fisher Q Exactive GC Orbitrap GC-MS/MS system](https://www.thermof…
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**Is your feature request related to a problem? Please describe.**
The docstrings in `toffy` are inconsistently formatted. It would be nice to include a pre-commit hook that verifies formatting.
…