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sgibb
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MALDIquant
Quantitative Analysis of Mass Spectrometry Data
https://strimmerlab.github.io/software/maldiquant/
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can I skip some steps when analyzing centroided data
#79
Haoran-pumc
closed
3 months ago
2
MALDI mass spec data format
#78
cathalgking
closed
5 months ago
1
Python version planned?
#77
ajinkya-kulkarni
closed
1 year ago
1
Change to new cran checks badge URL
#76
sckott
closed
1 year ago
2
Negative SNR
#75
zdens
closed
1 year ago
2
Quality Control
#74
frankcorn
closed
1 year ago
2
Unable to plot MALDI-TOF proteomics data collected in reflectron mode
#73
w2niva
closed
2 years ago
2
Reduced memory requirement for filterPeaks; closes #71
#72
sgibb
closed
2 years ago
2
Reduced memory requirement for filterPeaks
#71
paoloinglese
closed
2 years ago
4
using sparse matrix
#70
paoloinglese
opened
2 years ago
8
Peak binning on reference peaks
#69
ndevln
closed
2 years ago
2
Extracting intensities from a file from a predifined m/z list
#68
mgorkaq
closed
3 years ago
4
Averaging warping functions - plate by plate effect
#67
SamGG
closed
2 years ago
2
Fix error with R-devel reported in issue #65
#66
lgatto
closed
4 years ago
1
Error in plot,AbstractMassObject,missing with R-devel
#65
lgatto
closed
4 years ago
0
Massive memory usage while using mergeMassPeaks and FilterPeaks
#64
dsammour
opened
4 years ago
6
MALDIquant With WATERS DESI Data
#63
umara-Nissar
closed
4 years ago
11
On disk vector
#62
dsammour
opened
5 years ago
0
MALDIquant::binpeaks() silently propagates values to empty MassPeaks objects
#61
chasemc
closed
5 years ago
1
MassSpectrumOnDisk Functionality
#60
dsammour
opened
5 years ago
1
warping - obtain number of matched peaks
#59
foellmelanie
closed
5 years ago
1
raw MSI spectra as MassSpectra objects - size in memory
#58
dsammour
opened
5 years ago
25
Error and question regarding alignSpectra function
#57
foellmelanie
closed
6 years ago
7
binPeaks tolerance documentation
#56
chasemc
closed
6 years ago
3
One more thought on the average smoothing
#55
SiggiSmara
closed
6 years ago
2
Weighted moving average
#54
SiggiSmara
closed
6 years ago
3
Add weighted average to the spectrum smoothing?
#53
SiggiSmara
closed
6 years ago
1
Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ‘transformIntensity’ for signature ‘"character"’
#52
ghost
closed
6 years ago
9
Avoid division by zero in `calibrateIntensity`
#51
sgibb
closed
9 years ago
0
Rewrite description
#50
sgibb
closed
8 years ago
0
Update RforProteomics + ProtViz vignettes
#49
sgibb
closed
9 years ago
0
MSI vignette
#48
sgibb
closed
9 years ago
1
msi example in plotMsiSlice
#47
sgibb
closed
9 years ago
0
ProtGenerics
#46
lgatto
closed
9 years ago
7
parallel support
#45
sgibb
closed
9 years ago
0
move tests
#44
sgibb
closed
10 years ago
0
fix demo/workflow.R
#43
sgibb
closed
10 years ago
0
representation is deprecated
#42
sgibb
closed
10 years ago
0
add smoothIntensity method/function
#41
sgibb
closed
10 years ago
0
Monoisotopic Peak Detection
#40
sgibb
closed
8 years ago
0
remove hidden .replaceNonEmptyMassObjects
#39
sgibb
closed
10 years ago
0
remove hidden imputeMass
#38
sgibb
closed
10 years ago
0
remove deprecated functions
#37
sgibb
closed
10 years ago
0
fix methods NOTE
#36
sgibb
closed
10 years ago
0
replace fun argument by method argument in determineWarpingFunctions
#35
sgibb
closed
10 years ago
0
add example with own calibration peaks to determineWarpingFunctions.Rd
#34
sgibb
closed
10 years ago
0
mark iplot as deprecated
#33
sgibb
closed
10 years ago
0
add averageMassSpectra
#32
sgibb
closed
10 years ago
0
calibrate/normalize function for MassSpectrum objects
#31
sgibb
closed
10 years ago
0
deprecate TIC on MassPeaks
#30
sgibb
closed
10 years ago
0
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