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When derivatives of the objective function are available, MCMC methods that use them, for example Hamiltonian Monte Carlo, can be very much faster than MCMC methods that aren't. PINT has gone to great…
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Hi,
First, I'm really glad someone has started a project like this for Julia as the language has a lot of potential for implementing MCMC algorithms. I'd like to propose some small extensions to the…
nfoti updated
11 years ago
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[prior-srcmchirp]
name = external_func_fromfile
module = pycbc.distributions.external
file_path = /home/QiYanQing/GWTC_reweight/Bayesian_inference_20230203/CE/GW190421_213856/prob_chirp_mass_source…
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Hi,
I have a set of TESS data, and I want to use the `estimate_noise_out_of_transit` function. Unfortunately, I have this error:
```
Running pre-run loop 1 / 1
Traceback (most recent call la…
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AbstractMCMC@5 has `initial_state` as a mechanism to "resume" a chain.
This then begs the question: do we even need `resume_from` that is present in many sampler impls in Turing.jl?
https://gith…
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### Description
Encountered a XLARuntimeError while running a basic numpyro program using jax-metal. The issue arises when I try running the MCMC sampler.
```python
import numpyro
import nump…
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When I run the notebook for Chapter 2 on pymc2, it fails with the error below. It looks like current implementation is not compatible with numpy boolean subtract.
python version: 3.6
numpy version…
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Hi,
I am Taraka a post-doc working with linguistic phylogenetics. I implemented my MH sampler for sampling trees and other model parameters.
My code which runs mcmc process is here:
https://gith…
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I would like it very much if the pypesto sampling results could also be used in arviz as it offers more visualization procedures
and also other diagonostic methods.
Especially when using the Emcee…
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I come from the python astronomy community which includes an MCMC inference tool called the Ensemble Sampler ([code](https://github.com/dfm/emcee), [paper](https://arxiv.org/abs/1202.3665)). Dan has s…