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hi! I'm trying to process a data set with kilosort2 where we optogenetically inactivated neurons we were recording with the neuropixel probe. Each laser pulse creates a large artifact that is not filt…
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In the optomotor module there is a place to mount 20 LEDs, However on the Adafruit TLC 5947 only 10 outputs pins are used to drive the LEDs. I would like to know how we can connect 20 LEDs to 10 outpu…
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For any summer school suggestion that should be added to the list, please write a comment with the following information ;
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PhABC updated
4 years ago
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Hello,
I downloaded the data set (Steinmetz2019_Forssmann and Cori) and am trying to load it in MATLAB(R2019a) using the nwbRead function from the Allen Institute website. I adjusted the nwb-schema t…
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currently, optogenetic stimulation is only recorded as a boolean in the trials dataframe
we should be able to load a list of events (like licks or rewards) with durations that indicate optogenetic …
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I am testing the [ndx-icephys-meta](https://github.com/oruebel/ndx-icephys-meta) extension with matlab. The basic example in the `README.md` generates a file that can be read with matnwb.
But adding …
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moved here from https://github.com/NeurodataWithoutBorders/pynwb/issues/311 by @BCJongbloets
> In case of laser scanning photostimulation (in and ex vivo) the location of the photostimulation ('Opt…
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I am working with a biologist who is trying to use Deep LabCut for marking video footage of fish eating as part of her research into fish mouth eating behavior and mouth biomechanics. She is not getti…
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Dar JATS input:
```xml
optogenetics
two-photon
calcium imaging
Mouse
nada
si
```
Tasks (now):
- Create c…
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Group says:
- we would only need one keyword group
- we could add the optional content-type attribute for kwd elements to group keywords
- Users would prefer keyword sections in the user interfac…