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The phased.fasta was from shasta13 with herro corrected reads.
However, no output of GFAse.
~/zhaobaojun/app/gfase/GFAse/build/phase_haplotype_paths -i Assembly-Phased.gfa -p paternal.fa -m ma…
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Printing output should be human readable:
```
model = system_identification()
print(model)
```
and model specific,
e.g. ARMAX with IC=None output should look something like:
```
print(f''…
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In germline mode, there is no DR or DV field in the sample information, while the description of them occurred in the comment part
```plaintext
chr6 32648276 7184 N CSV . PASS END=32652372;SVLEN=4…
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Hello,
I ran the tool on a FASTA file representing a genome which contains many different contigs. I used `python Promotech-master/promotech.py -g -i results/ -o results/` to generate the final res…
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What is the file format that gets outputted from this? Do you have an example image and data pair you could…
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Currently RST10 and RST18 output only to the VDP
It would be nice to be able to redirect output to a file handle, and potentially to multiple handles simultaneously. This would allow for an Acorn-…
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### Check for previous/existing GitHub issues
- [x] I have checked for previous/existing GitHub issues
### Issue Type?
Bug
### (Optional) Module Version
v0.1.3
### (Optional) Correlation Id
_No…
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### Issue Description
When I pass `--output` it to `nexa run flux`, it does not respect the output directory location.
### Steps to Reproduce
Here I try to save to `/tmp/`, but it saves to a new `g…
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- is there a reason why the command rustic snapshots --json output is different from the from restic ?
whould it be possible to align rustic output to the restic one ?
The reason if for retro comp…