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The derivative of meso-2,6-diaminopimelc acid (ChEBI: 16488), 3-hydroxy-meso-2,6-diaminopimelic acid doesn't have any ID at the moment. It is also a constituent of the peptidoglycan in bacterial cell …
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GO:0061057 | peptidoglycan recognition protein signaling pathway is defined as a cell surface receptor signaling pathway, but it can also be mediated by an intracellular receptor (PMID:24706930).
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Some dipeptide don't have an ID on ChEBI,
1. D-Asp-L-Lys
2. D-Glu-L-Lys.
They occur in the peptidoglycan/murein in bacterial cell wall.
Both belong to the type A4alpha (Schleifer and Kandler,1972…
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DD-2,6-diaminopimelic acid,
is an other configuration of LL-2,6-diaminopimelic acid (ChEBI: 16026) and it doesn't have any ID at the moment.
2,4-diaminobutyric acid (ChEBI: 64307) have two config…
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Couple of issues for this wrt FBgn0035977 (PGRP-LF) - PGRP-LF is a transmembrane protein and is not have peptidoglycan binding (I've just added a NOT from PMID:21372849 and I have removed the IDA, whi…
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PAMP- triggered immunity (PTI) usually first line of defence
Upon association with PAMPs, the pattern-recognition receptors activate a downstream mitogen-activated protein kinase signaling cascade t…
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GO:0038023 signaling receptor activity needs has_input
(Note to self , fix PMID:30610168)
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CARD now has more than just acquired "antiobiotic resistant genes" (ARGs).
My old filtering of the `card.json` no longer gives me just ARGs. I get lots of virulence genes and efflux pumps etc.
W…
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We need to decide what to do with this branch
There is overlap with "response to" and other areas
GO:0051824 recognition of other organism involved in symbiotic interaction
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I could not locate this.
I was going to use just receptor but then I found
GO:0008329 signaling pattern recognition receptor activity
by a convoluted route.
Can we add exact synonyms
PA…