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Is there a way to make the data files uncompressed?
### Examples
```shell
# Current
•/vep -i variants.txt -o variants_output.txt --gff 'data-gff.gz' --fasta 'genome.fa.gz'
# Requested
•/vep -i…
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https://github.com/bids-standard/bids-validator/blob/2d923f501bcf97b14e612833fb1bcb3af39f2b67/bids-validator/bids_validator/tsv/non_custom_columns.json#L68
In BIDS we have `phenotype/.tsv` but not …
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Phenotypes for subclasses of 'abnormal sleep'
e.g. 'abnormal sleep bout duration', 'abnormal daytime sleep'
Curators to decide which classes will be most useful - may need new GO terms/new upheno …
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I still need to do mine. |I will start with the ones I recorded.
Also there are CC sessions which will have multi-gene phenotypes from before the interface was available. For example feedback for 1…
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if only one allele is being called, */1 , is this unknown or het
how to distinguish */1 and */0
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check these annotations.
https://www.pombase.org/reference/PMID:32355220
https://www.pombase.org/reference/PMID:34292936
I'm not sure that the isochore formation is decreased compared to wt, i…
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Hi @cmungall ,
We are planning on expanding Metadata Matrix to include phenotype mappings from Human Phenotype Ontology (HPO) and Mammalian Phenotype Ontology (MP).
I see there is a mapping file a…
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For example, amazonid and south_american are practically undistinguishable
```
--- amazonid.json 2020-08-08 01:56:10.665254935 +0300
+++ south_american.json 2020-05-28 22:04:40.854955048 +0…
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After setting up an initial version of the phenotype search results page, I noticed that some phenotypes are missing in the new database.
**Examples:**
`aberrant F-actin organization`
- [old pa…
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Hi everyone,
I am working with two datasets, one European and one Asian, and have successfully calculated LD scores. I have a total of 21 phenotypes. For most phenotypes, the meta-analysis ran succ…